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GenBank to FASTA accepts a GenBank file as input and returns the entire DNA sequence in FASTA format. Use this program when you wish to quickly remove all of the non-DNA sequence information from a GenBank file.

Paste the contents of one or more GenBank files into the text area below. Input limit is 200000 characters.

LOCUS       SUSFASCIN    2320 bp    mRNA            INV       14-MAR-2000
    DEFINITION  Strongylocentrotus purpuratus fascin (FSCN1) mRNA, complete cds.
    ACCESSION   L12047
    VERSION     L12047.1  GI:161470
    KEYWORDS    actin bundling protein; fascin.
    SOURCE      Strongylocentrotus purpuratus.
    ORGANISM  Strongylocentrotus purpuratus
    Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea;
    Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae;
    Strongylocentrotus.
    REFERENCE   1  (bases 1 to 2320)
    AUTHORS   Kane,R.E.
    TITLE     Actin polymerization and interaction with other proteins in
    temperature-induced gelation of sea urchin egg extracts
    JOURNAL   J. Cell Biol. 71 (3), 704-714 (1976)
    MEDLINE   77051438
    REFERENCE   2  (bases 1 to 2320)
    AUTHORS   Bryan,J. and Kane,R.E.
    TITLE     Separation and interaction of the major components of sea urchin
    actin gel
    JOURNAL   J. Mol. Biol. 125 (2), 207-224 (1978)
    MEDLINE   79091184
    REFERENCE   3  (bases 1 to 2320)
    AUTHORS   Bryan,J., Edwards,R., Matsudaira,P., Otto,J. and Wulfkuhle,J.
    TITLE     Fascin, an echinoid actin-bundling protein, is a homolog of the
    Drosophila singed gene product
    JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 90 (19), 9115-9119 (1993)
    MEDLINE   94022326
    FEATURES             Location/Qualifiers
    source          1..2320
    /organism="Strongylocentrotus purpuratus"
    /db_xref="taxon:7668"
    /dev_stage="larva"
    gene            1..2320
    /gene="FSCN1"
    CDS             85..1575
    /gene="FSCN1"
    /function="actin bundling protein"
    /note="putative"
    /codon_start=1
    /product="fascin"
    /protein_id="AAC37183.1"
    /db_xref="GI:161471"
    /translation="MPAMNLKYKFGLVNSAGRYLTAEKFGGKVNASGATLKARQVWIL
    EQEESSTISYLKAPSGNFLSADKNGNVYCSVEDRTEDADTGFEIELQPDGKWALKNVS
    HQRYLACNGEELICSESSTSNPSANWTVQLAIHPQVCMKNVQHQRYAHLKTSEEGEDS
    VVVDELVPWGADSTLTLVYLGKGKYGLEAFNGKFVQTDGQLAGTANEQTQFTLIFTSG
    HLVLRDNNGRHLGVDSGTRVLKSSKPGLTKANYFILEDSCPQGAFEFGGKYASLKQGE
    DVSFKLLVDEDIEDTETFQLEFVETDKYAIRVCDPKKNSRDAKFWKTVAAGIQANGNS
    KDQTDCQFSVEYNGNDMHVRAPGGKYVSVRDNGHLFLQDSPKDFIFRLLNRPKLVLKC
    PHGFVGMKEGKAEVACNRSNFDVFTVTYKEGGYTIQDSCGKYWSCDDSSRIVLGEAAG
    TFFFEFHELSKFAIRAESNGMLIKGEQSGLFTANGSEVSKDTLWEF"
    polyA_signal    2155..2160
    /gene="FSCN1"
    BASE COUNT      699 a    510 c    528 g    583 t
    ORIGIN
    1 acttgaaagt ggataaaatc gactgatacc aaaacaacat tgttttacag aagtggtcgt
    61 ttgaggacat caacatattt cacaatgcct gctatgaatt taaaatacaa atttggcctg
    121 gtcaactcgg ccggcagata cctcactgct gagaagtttg gtggcaaagt caatgcctca
    181 ggagcaacgt taaaagccag gcaagtatgg atcctagagc aagaagagag cagcacgatc
    241 agctacttga aggcgccctc tggtaacttc ctctctgcag ataaaaacgg taacgtctat
    301 tgcagtgttg aggacaggac ggaggacgcg gatacaggat tcgagatcga gttgcaaccc
    361 gatggtaaat gggccctcaa gaatgtttct caccagaggt acctagcttg caatggtgag
    421 gagctgatct gcagtgaatc cagcaccagc aacccctcag caaactggac tgtccagctg
    481 gccatccatc cacaggtctg catgaagaac gtccagcacc aacgctacgc acatctcaaa
    541 accagtgagg agggtgaaga cagcgtggtt gtagacgaat tggttccctg gggagctgat
    601 tccacactca ctcttgtcta cctgggcaaa ggaaagtacg gccttgaggc cttcaacgga
    661 aagtttgtcc aaaccgacgg acagcttgct ggcacagcca acgaacagac gcagttcaca
    721 ctcatcttca catccggtca cctggtacta agggacaaca atggacgtca cttaggagtg
    781 gacagtggaa ccagggtctt gaagtcctcc aagcctggac tgacgaaagc caattacttc
    841 atcctagagg atagctgtcc acaaggtgcc ttcgaatttg gtggcaaata tgcatcgtta
    901 aagcaaggcg aagatgtttc attcaagctt cttgttgacg aagatatcga agacacagag
    961 accttccagt tggagttcgt tgaaaccgac aagtatgcca tcagggtatg tgaccccaag
    1021 aagaactcca gagatgctaa gttctggaag accgtcgctg ctggtatcca ggctaacggc
    1081 aactcaaagg accagacgga ctgtcaattc tctgtcgaat acaacggcaa cgacatgcat
    1141 gtgcgtgctc caggaggcaa gtatgttagt gtccgtgaca acggccatct cttccttcag
    1201 gattcaccca aagacttcat cttccgtctg ctcaaccgac ccaagctggt gctcaagtgc
    1261 cctcatggat tcgtgggcat gaaggagggc aaggctgagg tcgcctgcaa ccgatcaaac
    1321 tttgatgtct tcactgtcac ctacaaggaa ggcggataca ctatccaaga ctcctgtggc
    1381 aagtactggt cttgtgatga cagtagccgc atcgttcttg gagaggcagc aggtactttc
    1441 ttcttcgagt tccatgagct ctccaagttt gctatccgag cagaaagcaa cggcatgttg
    1501 atcaagggcg agcagagtgg cttgtttacc gccaatggtt ccgaggtctc aaaggacaca
    1561 ctgtgggaat tctaaacaaa ttgggcttga aagaagccaa atccaaatca gaagtagagt
    1621 agctgacaag ccagccactc tatctattat atcaattgca aatattgtac atttttttaa
    1681 tacaaaaata ttttcaaagg tgcataataa ttatttcata ctctggtggg atctttagga
    1741 tcatattttc tcattgcctt ggcatactga cttccattat ccctcatttt ttaaaaggta
    1801 aattgatcac ttaatatcaa ctgaaaacga aatggaagta ggtctctgga aatttagaag
    1861 aatagatgac tatccagtat attcaaatat ttgttgaacc tgtctcaaaa aaaccccata
    1921 aaaaaccctc tgttttgtgc tgtctcatag ccataaatag agatcaattc tggtggtata
    1981 tgctacttaa aatcaggctt gaaatagaat aaatggaatg gaatggattt tcaaaaagat
    2041 ttggaatttt aaatttgcag ccagtgtccg tgacaactct tgcataccag aagcactaaa
    2101 cagtctctgc cgcaccgctc gcccaggtgt attgttgtga ctgtactttt gaacaataaa
    2161 acagatcttt tcgtcaagtt tggatataaa agtggattga aatgcacgaa tagattcgac
    2221 ttgtataggg catggtggac attgatttta cagatacttt caatataccg gtaaaaatca
    2281 atcatataga aaatgaaaac agggtgtaat atctcaaata
    //